Class: GlyDevKit::Subsumption

Inherits:
Object
  • Object
show all
Defined in:
lib/glydevkit/subsumption.rb

Instance Method Summary collapse

Instance Method Details

#baseComposition(w) ⇒ Object

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# File 'lib/glydevkit/subsumption.rb', line 59

def baseComposition(w)
  g = nil
  begin
    g = BaseComposition.beBorn(GraphManager.toGraph(w))
    return GraphManager.toWURCS(g)
  rescue WURCSException => e
    puts e.message
  rescue GraphManagerException => e
    puts e.message
  end
end

#baseCompositionWithLinkage(w) ⇒ Object

出来てる

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# File 'lib/glydevkit/subsumption.rb', line 46

def baseCompositionWithLinkage(w) #出来てる
  g = nil
  begin
    g = BaseCompositionWithLinkage.beBorn(GraphManager.toGraph(w))
    return GraphManager.toWURCS(g)
  rescue WURCSException => e
    puts e.message
  rescue GraphManagerException => e
    puts e.message
  end
end

#compositionWithLinkage(w) ⇒ Object

出来てる

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# File 'lib/glydevkit/subsumption.rb', line 40

def compositionWithLinkage(w) #出来てる
  g = CompositionWithLinkage.beBorn(GraphManager.toGraph(w))
  return GraphManager.toWURCS(g)
end

#monosaccharideCompositionWithoutLinkage(w) ⇒ Object

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# File 'lib/glydevkit/subsumption.rb', line 29

def monosaccharideCompositionWithoutLinkage(w)
  g = nil
  begin
    g = MonosaccharideCompositionWithoutLinkage.beBorn(GraphManager.toGraph(w))
    return GraphManager.toWURCS(g)
  rescue WURCSException, GraphManagerException => e
    puts e.message
  end
end

#topology(w) ⇒ Object

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# File 'lib/glydevkit/subsumption.rb', line 15

def topology(w)
  g = nil
  begin
    g = Topology.beBorn(GraphManager.toGraph(w))
  rescue GraphManagerException => e
    e.printStackTrace()
  rescue WURCSException => e
    e.printStackTrace()
  end
  kotae = GraphManager.toWURCS(g)
  return kotae
end